fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing. [ paper-2017 ]
NimMIT Licensesteady
Bioinformatics BAM File Utilities
Search all Bioinformatics projects →7 projectsNext Generation Sequencing › BAM File Utilities
- 14%active
- 14%steady
- 29%slowing
- 43%dormant
BAM File Utilities
Collection of tools for working with BAM files. [ paper-2011 ]
C++MIT Licenseslowing
Fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs. [ paper-2020 ]
NimMIT Licenseactive
Telseq is a tool for estimating telomere length from whole genome sequence data. [ paper-2014 ]
C++GNU General Public License v3.0dormant
Displaying sequence statistics for next-generation sequencing. [ paper-2010 | web ]
COtherdormant
Automate common SAM & BAM conversions.
Pythondormant
MtDNA:Nuclear Coverage; BAM Toolbox can output the ratio of MtDNA:nuclear coverage, a proxy for mitochondrial content.
PythonMIT Licenseslowing
Back to Awesome BioinformaticsSearch Awesome Bioinformatics →