Burrow-Wheeler Aligner for pairwise alignment between DNA sequences.
CGNU General Public License v3.0active
Bioinformatics Pairwise
Search all Bioinformatics projects →6 projectsNext Generation Sequencing › Sequence Alignment › Pairwise
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Pairwise
An ultrafast protein aligner for blastp and blastx like searches. [ paper-2021 ]
C++GNU General Public License v3.0active
An ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. [ paper-2012 | web ]
C++GNU General Public License v3.0active
A system for rapidly aligning entire genomes, whether in complete or draft form. [ paper-1999 | paper-2002 | paper-2004 | web ]
C++Artistic License 2.0slowing
SIMD C library for global, semi-global, and local pairwise sequence alignments [ paper-2016 ]
COthersteady
BWA-MEM drop-in replacement: 2-3x faster, 2-5x cheaper, 100% identical output on standard CPUs. [ paper-2026 ]
CMIT Licensesteady
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